Journal of Animal Breeding and Genomics (J Anim Breed Genom)
Thisarani Kalhari Ediriweera, and Jun Heon Lee*
Department of Bio-AI Convergence, Chungnam National University, Daejeon 34134, Korea
Correspondence to Jun Heon Lee, E-mail: junheon@cnu.ac.kr
Volume 6, Number 4, Pages 233-239, December 2022.
Journal of Animal Breeding and Genomics 2022, 6(4), 233-239. https://doi.org/10.12972/jabng.20220025
Received on August 04, 2022, Revised on December 23, 2022, Accepted on December 26, 2021, Published on December 31, 2022.
Copyright © 2022 Korean Society of Animal Breeding and Genetics.
This is an Open Access article distributed under the terms of the Creative Commons Attribution Non-Commercial License (http://creativecommons.org/licenses/by-nc/4.0).
Whole Genome Sequencing (WGS) provides high throughput sequencing data that reveals the true nature of the complete genome of an individual. The present study has used Ogye chicken WGS data to technically adduce the consensus sequence recovery and visualization of their assembly. Accordingly, they were mapped to NCBI accession: NC_052547.1 (of GRCg7b) using the Geneious mapper of Geneious Prime® software package. The mapping procedure was described step by step with the settings used, and visualizations were illustrated. This technique can effectively be applied in the Geneious Prime® platform to consensus sequence recovery coupled with appealing and elaborative visualizations.
Assembly, Consensus, Visualization, Whole Genome Sequencing
This work was supported by the Institute of Information & communications Technology Planning & Evaluation (IITP) grant funded by the Korean government (MSIT) (No.2020-0-01441, Artificial Intelligence Convergence Research Center (Chungnam National University).
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